CDS

Accession Number TCMCG006C30865
gbkey CDS
Protein Id XP_022545775.1
Location complement(join(3165203..3165663,3165785..3165833,3165921..3166050,3166132..3166274,3166349..3166489,3166566..3166706,3166794..3166982,3167265..3167360,3167566..>3167913))
Gene LOC111199753
GeneID 111199753
Organism Brassica napus

Protein

Length 565aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022690054.1
Definition DEAD-box ATP-dependent RNA helicase 39-like, partial [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD/DEAH box helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070180        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0110102        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901259        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
TCTCACTTCATCGCAGATCCTGATCAATTAAAGTACACGATCTTGCTGGAGAGGCTTCCGCTCAGACATTTGAAGGAATCGGCGGCGAAACCACAACCAAGGCCGAGCAGCGTCGTTGGCATAGAGGAAGAGAAAGGCATTAAGAGTAAGAAGAAGAAGATGGCTGAAAGTTTCGAGGAGCTAGGGCTAAGCGAGGAAGTGATGGGAGCTTTGAAAGAGATGAGCATTGAGGCTCCTACTGAGATTCAATGTATCGGAATACCTGCTGTTATGGATCGCAAGAGCGTCGTCTTGGGGTCCCACACCGGCTCCGGCAAGACTCTTGCCTACTTGCTTCCTATTGTTCAGCTGATGAGAGAAGATGAGGCAACCGTTGGTAAAATAACTAAGCCTAGGCGTCCCAGGACTGTTGTTCTCTGTCCCACCAGAGAACTCTCTGAGCAGGTTTACCGTGTGGCAAAGTCCGTAAGCCACCACGCGAGGTTCAGATCTATATTAGTTAGCGGTGGTTCTCGGATAAGACCACAGGAGGATTCGTTGAACAATGCAATAGACATGGTTGTTGGAACCCCTGGTAGGATTCTTCAGCACATCGAAGAAGGAAACATGGTCTATGGAGATATTGCGTATTTGGTGCTTGATGAGGCAGACACTATGTTTGATCGTGGCTTCGGTCCCGACATTCGCAAGTTTCTTGCCCCACTGAAACAGCGCGCGTTGAAAACAAATGACCAAGGGTTTCAAACCGTCTTAGTCACTGCCACTATGACAACGGCTGTTCAGAAGTTAGTCGATGAGGAGTTTCAAGGGATAGAGCATTTGCGAACATCAACATTGCATAAGAAGATAGCAAATGCTCGGCATGACTTCGTCAAGCTTTCAGGTAGCGAAGATAAGCTAGAAGCACTTCTACAGGTTCTTGAACCTAGCTTAGCCAAAGGGAGCAAGGTGATGGTCTTCTGTAACACTTTGAACTCCAGCCGTGCCGTCGATCACTATCTTTCTGAAAACCAGGTCTCTACTGTGAATTATCACGGTGAAGTTCCAGCAGAACAAAGGGTTGAGAACTTGAAAAAGTTTAAGGACGAAGAAGGAGACTGCCCCACGCTGGTGTGCACTGATTTGGCTGCGAGGGGTCTGGACCTTGACGTGGATCATGTAATCATGTTTGATTTTCCAAAGAACTCTATTGACTACCTTCATCGCACTGGAAGAACAGCTCGCATGGGCGCTAAAGGAAAAGTGACGAGTCTGATAAGCAGGAAGGACCAAATGTTAGCAGCTAGAATCGAAGAAGCTATGAGAAACAACGAGAGCTTAGAAGCACTTACCAACGATAACGTGAGGAGGGATGCTGCAAGAACCCAAATCACTCAGGAGAAAGGAAGGAGCGTTAAGCAGATCAGAGCAGTGAGCAAGCAACGAAACACTAGAGACAGAGGAACATCATCATCTCCACCTGCAAGACCAGCAGGTGTGAAGACACCAGTGAGAAAGTCTACTTCAGTGAGAAAGTCAACTTCGGGAAGAGCATCCTCTCCTCCAGAAAAGTCTACAAAGCCCAAGAGAAAAATATTGAAGACGGTTGGATCCAGATCGATAGCTGCGAGGGGGAAGAAGGGTTCAGAGAGAACAGGTAAGAAACTAAGTGTTGTTGGGTTCAGAGGTCGGTCTTCTGCGGCTAGACCCTCTTCTTGA
Protein:  
SHFIADPDQLKYTILLERLPLRHLKESAAKPQPRPSSVVGIEEEKGIKSKKKKMAESFEELGLSEEVMGALKEMSIEAPTEIQCIGIPAVMDRKSVVLGSHTGSGKTLAYLLPIVQLMREDEATVGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPDIRKFLAPLKQRALKTNDQGFQTVLVTATMTTAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFVKLSGSEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQVSTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSIDYLHRTGRTARMGAKGKVTSLISRKDQMLAARIEEAMRNNESLEALTNDNVRRDAARTQITQEKGRSVKQIRAVSKQRNTRDRGTSSSPPARPAGVKTPVRKSTSVRKSTSGRASSPPEKSTKPKRKILKTVGSRSIAARGKKGSERTGKKLSVVGFRGRSSAARPSS